STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA92642.1PFAM: Flp/Fap pilin component. (63 aa)    
Predicted Functional Partners:
KPA92643.1
PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
  
  
 0.780
KPA92644.1
Flp pilus assembly protein, ATPase CpaE; PFAM: AAA domain.
  
  
 0.711
KPA90152.1
PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
  
  
 0.641
KPA92641.1
PFAM: Response regulator receiver domain.
  
    0.625
KPA90156.1
Flp pilus assembly protein, ATPase CpaE; PFAM: AAA domain; Response regulator receiver domain.
  
  
 0.608
KPA92645.1
Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein.
  
  
 0.582
KPA92649.1
Flp pilus assembly protein, protease CpaA; PFAM: Type IV leader peptidase family.
  
  
 0.574
KPA92646.1
'PFAM: Type II secretion system (T2SS), protein F'.
  
  
 0.573
KPA92647.1
Flp pilus assembly protein TadC; 'PFAM: Type II secretion system (T2SS), protein F'.
  
  
 0.572
KPA90162.1
Flp pilus assembly protein, secretin CpaC; PFAM: Bacterial type II and III secretion system protein; Pilus formation protein N terminal region; Belongs to the bacterial secretin family.
  
  
 0.525
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.