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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA92650.1PFAM: TadE-like protein. (148 aa)    
Predicted Functional Partners:
KPA92651.1
PAS domain S-box; 'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold'; TIGRFAM: PAS domain S-box.
 
    0.942
KPA92643.1
PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
 
  
 0.908
KPA92644.1
Flp pilus assembly protein, ATPase CpaE; PFAM: AAA domain.
 
  
 0.908
KPA92647.1
Flp pilus assembly protein TadC; 'PFAM: Type II secretion system (T2SS), protein F'.
 
  
 0.866
KPA90161.1
PFAM: TPR repeat.
 
  
 0.812
KPA92646.1
'PFAM: Type II secretion system (T2SS), protein F'.
 
  
 0.811
KPA92652.1
PFAM: Putative Tad-like Flp pilus-assembly.
 
     0.797
KPA90162.1
Flp pilus assembly protein, secretin CpaC; PFAM: Bacterial type II and III secretion system protein; Pilus formation protein N terminal region; Belongs to the bacterial secretin family.
 
  
 0.754
KPA92207.1
PFAM: Fatty acid desaturase.
  
     0.743
KPA89824.1
Membrane protease subunit, stomatin/prohibitin; PFAM: SPFH domain / Band 7 family; overlaps another CDS with the same product name.
  
    0.728
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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