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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA91062.1Sulfur relay protein, TusE/DsrC/DsvC family; Part of a sulfur-relay system. (111 aa)    
Predicted Functional Partners:
KPA91059.1
PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusD/DsrE.
 
 
 0.992
KPA91061.1
PFAM: DsrH like protein; TIGRFAM: sulfur relay protein TusB/DsrH.
 
 
 0.981
KPA91060.1
PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusC/DsrF; Belongs to the DsrF/TusC family.
 
  
 0.972
KPA91063.1
Anthranilate phosphoribosyltransferase; 'PFAM: Glycosyl transferase family, helical bundle domain'.
 
    0.903
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
   
 0.844
KPA88376.1
NADH dehydrogenase, FAD-containing subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
    
 0.746
KPA91058.1
FtsH-interacting integral membrane protein; PFAM: Inhibitor of apoptosis-promoting Bax1; Belongs to the BI1 family.
     
 0.604
KPA91064.1
'PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain'.
       0.586
KPA91568.1
FAD/FMN-dependent dehydrogenase; 'PFAM: Cysteine-rich domain; 4Fe-4S dicluster domain; FAD binding domain; FAD linked oxidases, C-terminal domain'.
 
 
 
 0.529
KPA87373.1
Fe-S oxidoreductase; PFAM: Cysteine-rich domain; 4Fe-4S dicluster domain; Domain of unknown function (DUF3483).
   
 
 0.487
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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