Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPA90642.1 | KPA90643.1 | PF66_02703 | PF66_02704 | Conserved hypothetical protein, PP_1857 family; PFAM: putative protein conserved in bacteria (DUF2331); 'TIGRFAM: conserved hypothetical protein, PP_1857 family'. | Hypothetical protein. | 0.584 |
KPA90642.1 | KPA90644.1 | PF66_02703 | PF66_02705 | Conserved hypothetical protein, PP_1857 family; PFAM: putative protein conserved in bacteria (DUF2331); 'TIGRFAM: conserved hypothetical protein, PP_1857 family'. | 'PFAM: Transcription elongation factor, GreA/GreB, C-term'. | 0.584 |
KPA90642.1 | efp | PF66_02703 | PF66_02702 | Conserved hypothetical protein, PP_1857 family; PFAM: putative protein conserved in bacteria (DUF2331); 'TIGRFAM: conserved hypothetical protein, PP_1857 family'. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.996 |
KPA90643.1 | KPA90642.1 | PF66_02704 | PF66_02703 | Hypothetical protein. | Conserved hypothetical protein, PP_1857 family; PFAM: putative protein conserved in bacteria (DUF2331); 'TIGRFAM: conserved hypothetical protein, PP_1857 family'. | 0.584 |
KPA90643.1 | KPA90644.1 | PF66_02704 | PF66_02705 | Hypothetical protein. | 'PFAM: Transcription elongation factor, GreA/GreB, C-term'. | 0.797 |
KPA90643.1 | efp | PF66_02704 | PF66_02702 | Hypothetical protein. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.498 |
KPA90644.1 | KPA90642.1 | PF66_02705 | PF66_02703 | 'PFAM: Transcription elongation factor, GreA/GreB, C-term'. | Conserved hypothetical protein, PP_1857 family; PFAM: putative protein conserved in bacteria (DUF2331); 'TIGRFAM: conserved hypothetical protein, PP_1857 family'. | 0.584 |
KPA90644.1 | KPA90643.1 | PF66_02705 | PF66_02704 | 'PFAM: Transcription elongation factor, GreA/GreB, C-term'. | Hypothetical protein. | 0.797 |
KPA90644.1 | efp | PF66_02705 | PF66_02702 | 'PFAM: Transcription elongation factor, GreA/GreB, C-term'. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.561 |
efp | KPA90642.1 | PF66_02702 | PF66_02703 | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Conserved hypothetical protein, PP_1857 family; PFAM: putative protein conserved in bacteria (DUF2331); 'TIGRFAM: conserved hypothetical protein, PP_1857 family'. | 0.996 |
efp | KPA90643.1 | PF66_02702 | PF66_02704 | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Hypothetical protein. | 0.498 |
efp | KPA90644.1 | PF66_02702 | PF66_02705 | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 'PFAM: Transcription elongation factor, GreA/GreB, C-term'. | 0.561 |