STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA90292.1'PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region'; 'TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain'; Belongs to the ABC transporter superfamily. (337 aa)    
Predicted Functional Partners:
KPA90290.1
PFAM: Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C.
 
 0.987
KPA90289.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.985
KPA91327.1
PFAM: Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C.
 
 0.974
KPA91839.1
PFAM: Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C.
 
 0.960
KPA90293.1
ABC-type dipeptide transport system, periplasmic component; 'PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle'.
 
 
 0.956
KPA90291.1
'PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region'; 'TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain'; Belongs to the ABC transporter superfamily.
 
 
 
0.949
KPA87654.1
PFAM: Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C.
 
 0.949
KPA88278.1
PFAM: Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C.
 
 0.944
KPA91328.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.935
KPA87653.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.935
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.