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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA90299.1Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; 'PFAM: Bacterial regulatory proteins, luxR family'. (275 aa)    
Predicted Functional Partners:
KPA90371.1
PAS domain S-box; 'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; CHASE domain; Hpt domain; PAS fold'; TIGRFAM: PAS domain S-box.
    
 0.782
KPA90298.1
PFAM: Outer membrane efflux protein; 'TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family'.
       0.780
KPA88317.1
PAS domain S-box; 'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; CHASE domain; Hpt domain; PAS fold'; TIGRFAM: PAS domain S-box.
    
 0.737
KPA91003.1
'PFAM: HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; Hpt domain'.
     
 0.683
KPA92831.1
N-acyl-L-homoserine lactone synthetase; PFAM: Autoinducer synthetase.
  
 
 0.630
KPA87612.1
N-acyl-L-homoserine lactone synthetase; PFAM: Autoinducer synthetase.
  
 
 0.630
KPA87586.1
N-acyl-L-homoserine lactone synthetase; PFAM: Autoinducer synthetase.
  
 
 0.630
KPA93011.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
    
   0.528
KPA90459.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
    
   0.528
KPA89317.1
Zn-dependent hydrolase, glyoxylase; PFAM: Metallo-beta-lactamase superfamily.
    
   0.528
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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