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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA89988.1Hypothetical protein. (263 aa)    
Predicted Functional Partners:
KPA89989.1
(SSU ribosomal protein S18P)-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.797
KPA89987.1
Hypothetical protein.
 
     0.786
KPA89985.1
Hypothetical protein.
 
     0.777
KPA92527.1
Putative membrane protein affecting hemolysin expression; PFAM: HAMP domain; Bacterial virulence factor hemeolysin.
  
     0.769
KPA92283.1
Hypothetical protein.
  
     0.767
KPA91200.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1883).
  
     0.767
KPA92493.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; overlaps another CDS with the same product name.
  
     0.764
KPA88768.1
Hypothetical protein; PFAM: Domain of unknown function (DUF4381).
  
     0.752
KPA89154.1
Hypothetical protein.
  
     0.751
KPA92495.1
PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; overlaps another CDS with the same product name.
  
     0.742
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.