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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA90027.1Hypothetical protein. (517 aa)    
Predicted Functional Partners:
KPA90025.1
ABC-type polysaccharide/polyol phosphate exporter; PFAM: ABC-2 type transporter.
       0.773
KPA90026.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter; Wzt C-terminal domain.
       0.773
KPA90028.1
Hypothetical protein.
       0.773
KPA90029.1
Hypothetical protein.
       0.773
KPA90030.1
Hypothetical protein.
       0.773
KPA90031.1
PFAM: Glycosyl transferase family 2.
       0.752
KPA90024.1
PFAM: NAD dependent epimerase/dehydratase family.
       0.645
cysC-3
Adenylylsulfate kinase ApsK; Catalyzes the synthesis of activated sulfate.
       0.561
KPA90022.1
Putative PLP-dependent enzyme; Possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
       0.474
KPA90023.1
Nucleoside-diphosphate-sugar pyrophosphorylase family protein; PFAM: Nucleotidyl transferase.
       0.474
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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