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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA90031.1PFAM: Glycosyl transferase family 2. (308 aa)    
Predicted Functional Partners:
KPA90025.1
ABC-type polysaccharide/polyol phosphate exporter; PFAM: ABC-2 type transporter.
  
  
 0.862
KPA90026.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter; Wzt C-terminal domain.
  
  
 0.797
KPA90029.1
Hypothetical protein.
  
  
 0.769
KPA90028.1
Hypothetical protein.
       0.759
KPA90030.1
Hypothetical protein.
       0.759
KPA90027.1
Hypothetical protein.
       0.752
KPA90024.1
PFAM: NAD dependent epimerase/dehydratase family.
    
 0.737
KPA88247.1
PFAM: Response regulator receiver domain.
   
   0.713
KPA88954.1
PFAM: Bacterial sugar transferase; CoA-binding domain; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.706
KPA88652.1
PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; 'TIGRFAM: flagellar hook-basal body protein; flagellar basal-body rod protein FlgG, Gram-negative bacteria'; Belongs to the flagella basal body rod proteins family.
  
   0.669
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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