close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA90033.1PFAM: 2-keto-3-deoxy-galactonokinase. (331 aa)    
Predicted Functional Partners:
KPA90034.1
PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase.
 
  
 0.993
KPA90035.1
Galactonate dehydratase; 'PFAM: Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain'.
 
 
 0.981
KPA88214.1
L-alanine-DL-glutamate epimerase; 'PFAM: Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain'.
 
 
 0.827
KPA88860.1
D-glucarate dehydratase; 'PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain'; TIGRFAM: glucarate dehydratase.
  
 
 0.763
KPA93132.1
PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase.
 
  
 0.762
KPA90037.1
PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
 
   
 0.713
KPA90036.1
D-galactonate transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter.
 
  
 0.684
KPA90046.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like; PFAM: short chain dehydrogenase.
 
     0.638
KPA91479.1
Muconate cycloisomerase; 'PFAM: Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain'; TIGRFAM: muconate and chloromuconate cycloisomerases.
  
 
 0.596
KPA90042.1
PFAM: Periplasmic binding proteins and sugar binding domain of LacI family.
 
   
 0.561
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.