Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KPA90034.1PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase. (206 aa)    
Predicted Functional Partners:
KPA90033.1
PFAM: 2-keto-3-deoxy-galactonokinase.
 
 
 0.997
KPA90035.1
Galactonate dehydratase; 'PFAM: Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain'.
 
   
 0.904
KPA93132.1
PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase.
  
  
 
0.855
KPA91316.1
PFAM: Aldehyde dehydrogenase family.
     
 0.803
KPA90037.1
PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
 
   
 0.774
KPA91952.1
PFAM: pfkB family carbohydrate kinase.
 
  
 0.743
KPA90036.1
D-galactonate transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter.
 
   
 0.715
KPA87683.1
'PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus; SAF domain'; TIGRFAM: galactarate dehydratase.
 
  
 0.687
KPA89358.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
 
  
 0.643
KPA88214.1
L-alanine-DL-glutamate epimerase; 'PFAM: Enolase C-terminal domain-like; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain'.
 
   
 0.565
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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