STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA89468.1PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW. (206 aa)    
Predicted Functional Partners:
metXS
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
  
 0.998
KPA89469.1
Hypothetical protein; PFAM: Domain of unknown function (DUF4426).
      0.909
KPA87223.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme C-terminal domain.
    
 0.859
KPA92127.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; Nonribosomal peptide synthase; Condensation domain; AMP-binding enzyme C-terminal domain; TIGRFAM: amino acid adenylation domain.
    
 0.858
KPA90326.1
Non-ribosomal peptide synthase; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; AMP-binding enzyme C-terminal domain; TIGRFAM: amino acid adenylation domain.
    
 0.858
KPA87556.1
PFAM: Cytochrome P450.
    
 0.825
KPA90306.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; AMP-binding enzyme C-terminal domain; TIGRFAM: amino acid adenylation domain.
   
 0.783
KPA90276.1
Amino acid adenylation enzyme/thioester reductase family protein; 'PFAM: HxxPF-repeated domain; Condensation domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site; Thioesterase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; AMP-binding enzyme C-terminal domain'; TIGRFAM: amino acid adenylation domain; overlaps another CDS with the same product name.
    
 0.777
KPA91708.1
PFAM: Luciferase-like monooxygenase; TIGRFAM: natural product biosynthesis luciferase-like monooxygenase domain.
    
 0.768
KPA90320.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Condensation domain; AMP-binding enzyme; AMP-binding enzyme C-terminal domain; TIGRFAM: amino acid adenylation domain.
    
 0.746
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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