STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA89363.1PFAM: Gluconate 2-dehydrogenase subunit 3. (246 aa)    
Predicted Functional Partners:
KPA89362.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
 
 0.996
KPA89652.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
 
 0.980
KPA89361.1
Cytochrome c, mono- and diheme variants family; 'PFAM: Cytochrome c; Cytochrome C oxidase, cbb3-type, subunit III'.
 
  
 0.961
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
  
 0.882
KPA89358.1
Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
  
 
 0.833
KPA88193.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c.
 
  
 0.827
KPA92079.1
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region.
  
  
 0.781
KPA89491.1
Choline dehydrogenase-like flavoprotein; PFAM: GMC oxidoreductase.
  
 0.777
KPA87378.1
Choline dehydrogenase-like flavoprotein; PFAM: FAD binding domain; Alpha/beta hydrolase family; GMC oxidoreductase.
  
 0.777
KPA89650.1
Cytochrome c, mono- and diheme variants family; 'PFAM: Cytochrome c; Cytochrome C oxidase, cbb3-type, subunit III'.
 
  
 0.742
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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