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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA89176.1Hypothetical protein. (362 aa)    
Predicted Functional Partners:
KPA89177.1
PFAM: Putative neutral zinc metallopeptidase.
       0.797
KPA92410.1
poly(R)-hydroxyalkanoic acid synthase, class II; PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; 'TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class II'.
     
 0.686
KPA92412.1
poly(R)-hydroxyalkanoic acid synthase, class II; PFAM: Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus; alpha/beta hydrolase fold; 'TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class II'.
     
 0.686
KPA92046.1
'PFAM: Type II secretion system (T2SS), protein J; Type IV pilin N-term methylation site GFxxxE'; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; type II secretion system protein J.
  
     0.580
KPA92184.1
PFAM: Tetratricopeptide repeat; 'TIGRFAM: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA'.
  
     0.567
KPA90295.1
Putative peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.553
KPA90294.1
Hypothetical protein.
 
     0.549
KPA91609.1
Large extracellular alpha-helical protein; PFAM: Alpha-macro-globulin thiol-ester bond-forming region; Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region.
 
     0.523
KPA87033.1
PFAM: YqaJ-like viral recombinase domain.
  
     0.522
KPA89178.1
Pca operon transcription factor PcaQ; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; TIGRFAM: pca operon transcription factor PcaQ; Belongs to the LysR transcriptional regulatory family.
       0.514
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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