STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA87576.1Transcriptional regulator; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family. (301 aa)    
Predicted Functional Partners:
KPA90443.1
Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.710
KPA90116.1
Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.676
KPA90637.1
Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.663
KPA87620.1
Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.655
KPA92233.1
Transcriptional regulator; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.651
KPA89319.1
Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.640
KPA92688.1
Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.633
KPA90416.1
Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.629
KPA93354.1
Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.619
KPA92002.1
Transcriptional regulator; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family.
  
     0.619
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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