STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKW77_004266Uncharacterized protein. (562 aa)    
Predicted Functional Partners:
FKW77_010274
Tr-type G domain-containing protein.
   
 0.972
FKW77_001653
Uncharacterized protein.
    
 0.963
PRP28
mRNA splicing protein prp28; Belongs to the DEAD box helicase family.
   
 0.955
FKW77_002076
SNRNP27 domain-containing protein.
   
 0.952
PRPF8
Pre-mRNA-processing-splicing factor 8.
   
 0.951
FKW77_008531
Nop domain-containing protein.
    
 0.949
FKW77_007278
WD_REPEATS_REGION domain-containing protein.
   
  0.939
FKW77_009344
WD_REPEATS_REGION domain-containing protein.
    
 0.931
FKW77_008153
Uncharacterized protein.
   
 0.930
SMD2
Small nuclear ribonucleoprotein Sm D2.
  
 
 0.920
Your Current Organism:
Venturia effusa
NCBI taxonomy Id: 50376
Other names: Fusicladium effusum, V. effusa, Venturia effusa (G. Winter) Rossman & W.C. Allen 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.