STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKW77_004615Uncharacterized protein. (377 aa)    
Predicted Functional Partners:
FKW77_009891
AAA domain-containing protein.
    
  0.722
FKW77_008675
Uncharacterized protein.
    
  0.722
FKW77_005516
Uncharacterized protein.
    
  0.722
CDC48
AAA ATPase cdc48; Belongs to the AAA ATPase family.
    
  0.722
FKW77_003420
Uncharacterized protein.
   
  0.651
FKW77_000628
ETF domain-containing protein.
     
 0.644
FKW77_004320
Uncharacterized protein.
    
  0.629
FKW77_000413
AAA domain-containing protein.
    
  0.629
FKW77_010087
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
  0.629
FKW77_000935
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
  0.629
Your Current Organism:
Venturia effusa
NCBI taxonomy Id: 50376
Other names: Fusicladium effusum, V. effusa, Venturia effusa (G. Winter) Rossman & W.C. Allen 2016
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