STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKW77_009461Uncharacterized protein. (426 aa)    
Predicted Functional Partners:
FKW77_008040
Uncharacterized protein.
    
 0.771
ARF6
ADP-ribosylation factor, Arf Arf6; Belongs to the small GTPase superfamily. Arf family.
    
 0.771
FKW77_009002
SH3 domain-containing protein.
    
 0.654
FKW77_003745
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.648
FKW77_004242
Pyr_redox_2 domain-containing protein.
    
  0.614
FKW77_006696
Uncharacterized protein.
    
 
 0.584
FKW77_002422
SH3 domain-containing protein.
   
 
 0.574
FKW77_010465
Ubiquitin-like domain-containing protein.
    
   0.573
FKW77_005818
Uncharacterized protein.
     
 0.547
ARL1
Arf GTPase arl1; Belongs to the small GTPase superfamily. Arf family.
    
 0.545
Your Current Organism:
Venturia effusa
NCBI taxonomy Id: 50376
Other names: Fusicladium effusum, V. effusa, Venturia effusa (G. Winter) Rossman & W.C. Allen 2016
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