Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FKW77_008844Uncharacterized protein. (644 aa)    
Predicted Functional Partners:
FKW77_005099
Uncharacterized protein.
 
   
  0.811
FKW77_010426
Uncharacterized protein.
     
  0.735
FKW77_007185
Citrate synthase; Belongs to the citrate synthase family.
   
 
  0.692
FKW77_010321
Citrate synthase; Belongs to the citrate synthase family.
   
 
  0.692
FKW77_006041
Citrate synthase; Belongs to the citrate synthase family.
   
 
  0.692
HH3V
Histone H3-like centromeric protein hH3v.
   
 0.625
HHT1
Histone H3.1.
   
 0.625
FKW77_003413
Uncharacterized protein.
   
 0.594
FKW77_002181
Uncharacterized protein.
    
  0.590
FKW77_000653
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.589
Your Current Organism:
Venturia effusa
NCBI taxonomy Id: 50376
Other names: Fusicladium effusum, V. effusa, Venturia effusa (G. Winter) Rossman & W.C. Allen 2016
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