STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKW77_008852Chalcone_isomerase domain-containing protein. (432 aa)    
Predicted Functional Partners:
FKW77_006987
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.967
FKW77_001246
zf-RING-like domain-containing protein.
    
 0.966
FKW77_001517
SMC_N domain-containing protein.
    
 0.965
FKW77_006512
SP-RING-type domain-containing protein.
    
 0.964
FKW77_001098
SMC_N domain-containing protein.
    
 0.964
FKW77_004663
Structural maintenance of chromosomes protein.
    
 0.827
FKW77_010262
Structural maintenance of chromosomes protein.
    
 0.818
FKW77_005082
BTB domain-containing protein.
    
 0.818
FKW77_010105
Structural maintenance of chromosomes protein.
    
 0.810
FKW77_004074
Structural maintenance of chromosomes protein.
    
 0.810
Your Current Organism:
Venturia effusa
NCBI taxonomy Id: 50376
Other names: Fusicladium effusum, V. effusa, Venturia effusa (G. Winter) Rossman & W.C. Allen 2016
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