STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKW77_004331Uncharacterized protein. (748 aa)    
Predicted Functional Partners:
FKW77_007575
Uncharacterized protein.
   
 
 0.919
FKW77_009163
Uncharacterized protein.
   
 
 0.765
FKW77_002788
S1 motif domain-containing protein.
   
 0.764
FKW77_008872
Uncharacterized protein.
   
 
0.762
RPS3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.761
RPS23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.757
RPL5
60S ribosomal protein L5.
   
   0.756
RPL7
60S ribosomal protein L7.
   
   0.753
RPL23A_2
60S ribosomal protein L23A.
   
 
 0.751
RPL35
60S ribosomal protein L35.
   
 
 0.750
Your Current Organism:
Venturia effusa
NCBI taxonomy Id: 50376
Other names: Fusicladium effusum, V. effusa, Venturia effusa (G. Winter) Rossman & W.C. Allen 2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.