Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DBP4 | FKW77_000365 | A0A517LF72 | A0A517LQG0 | RNA helicase. | Uncharacterized protein. | 0.784 |
DBP4 | FKW77_002204 | A0A517LF72 | A0A517L6T1 | RNA helicase. | U3 small nucleolar RNA-associated protein 22. | 0.984 |
DBP4 | FKW77_004923 | A0A517LF72 | A0A517KWB6 | RNA helicase. | G-patch domain-containing protein. | 0.747 |
DBP4 | FKW77_006560 | A0A517LF72 | A0A517LFP5 | RNA helicase. | G-patch domain-containing protein. | 0.877 |
DBP4 | FKW77_007010 | A0A517LF72 | A0A517LN35 | RNA helicase. | Uncharacterized protein. | 0.980 |
DBP4 | FKW77_007272 | A0A517LF72 | A0A517L7M9 | RNA helicase. | MI domain-containing protein. | 0.984 |
DBP4 | FKW77_008575 | A0A517LF72 | A0A517LBE4 | RNA helicase. | Uncharacterized protein. | 0.972 |
DBP4 | FKW77_008971 | A0A517LF72 | A0A517L7Y3 | RNA helicase. | S4 RNA-binding domain-containing protein. | 0.696 |
DBP4 | KRR1 | A0A517LF72 | A0A517L199 | RNA helicase. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.920 |
DBP4 | PRP43 | A0A517LF72 | A0A517LGA5 | RNA helicase. | DEAH-box ATP-dependent RNA helicase prp43. | 0.853 |
FKW77_000365 | DBP4 | A0A517LQG0 | A0A517LF72 | Uncharacterized protein. | RNA helicase. | 0.784 |
FKW77_000365 | FKW77_002204 | A0A517LQG0 | A0A517L6T1 | Uncharacterized protein. | U3 small nucleolar RNA-associated protein 22. | 0.999 |
FKW77_000365 | FKW77_004923 | A0A517LQG0 | A0A517KWB6 | Uncharacterized protein. | G-patch domain-containing protein. | 0.463 |
FKW77_000365 | FKW77_006560 | A0A517LQG0 | A0A517LFP5 | Uncharacterized protein. | G-patch domain-containing protein. | 0.812 |
FKW77_000365 | FKW77_007010 | A0A517LQG0 | A0A517LN35 | Uncharacterized protein. | Uncharacterized protein. | 0.984 |
FKW77_000365 | FKW77_007272 | A0A517LQG0 | A0A517L7M9 | Uncharacterized protein. | MI domain-containing protein. | 0.961 |
FKW77_000365 | FKW77_008575 | A0A517LQG0 | A0A517LBE4 | Uncharacterized protein. | Uncharacterized protein. | 0.996 |
FKW77_000365 | FKW77_008971 | A0A517LQG0 | A0A517L7Y3 | Uncharacterized protein. | S4 RNA-binding domain-containing protein. | 0.996 |
FKW77_000365 | KRR1 | A0A517LQG0 | A0A517L199 | Uncharacterized protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.997 |
FKW77_000365 | PRP43 | A0A517LQG0 | A0A517LGA5 | Uncharacterized protein. | DEAH-box ATP-dependent RNA helicase prp43. | 0.870 |
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