Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FKW77_000404 | FKW77_002095 | A0A517L2L6 | A0A517LI77 | RRM domain-containing protein. | Uncharacterized protein. | 0.693 |
FKW77_000404 | FKW77_003410 | A0A517L2L6 | A0A517L2Y1 | RRM domain-containing protein. | Uncharacterized protein. | 0.801 |
FKW77_000404 | FKW77_006864 | A0A517L2L6 | A0A517LP76 | RRM domain-containing protein. | Small nuclear ribonucleoprotein Sm D3. | 0.488 |
FKW77_000404 | FKW77_008954 | A0A517L2L6 | A0A517LBI0 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.423 |
FKW77_000404 | NCBP2 | A0A517L2L6 | A0A517L0R8 | RRM domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.813 |
FKW77_001436 | FKW77_002095 | A0A517LBV4 | A0A517LI77 | Uncharacterized protein. | Uncharacterized protein. | 0.693 |
FKW77_001436 | FKW77_002937 | A0A517LBV4 | A0A517LAM3 | Uncharacterized protein. | RRM domain-containing protein. | 0.826 |
FKW77_001436 | FKW77_003410 | A0A517LBV4 | A0A517L2Y1 | Uncharacterized protein. | Uncharacterized protein. | 0.564 |
FKW77_001436 | FKW77_006864 | A0A517LBV4 | A0A517LP76 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D3. | 0.972 |
FKW77_001436 | FKW77_008954 | A0A517LBV4 | A0A517LBI0 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.977 |
FKW77_001436 | NCBP2 | A0A517LBV4 | A0A517L0R8 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.900 |
FKW77_001436 | SMD1 | A0A517LBV4 | A0A517L7A8 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.973 |
FKW77_001436 | SME1 | A0A517LBV4 | A0A517L1Z8 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.971 |
FKW77_001436 | SMG1 | A0A517LBV4 | A0A517KYG9 | Uncharacterized protein. | Small nuclear ribonucleoprotein G. | 0.968 |
FKW77_002095 | FKW77_000404 | A0A517LI77 | A0A517L2L6 | Uncharacterized protein. | RRM domain-containing protein. | 0.693 |
FKW77_002095 | FKW77_001436 | A0A517LI77 | A0A517LBV4 | Uncharacterized protein. | Uncharacterized protein. | 0.693 |
FKW77_002095 | FKW77_002937 | A0A517LI77 | A0A517LAM3 | Uncharacterized protein. | RRM domain-containing protein. | 0.693 |
FKW77_002095 | FKW77_003410 | A0A517LI77 | A0A517L2Y1 | Uncharacterized protein. | Uncharacterized protein. | 0.723 |
FKW77_002095 | FKW77_006864 | A0A517LI77 | A0A517LP76 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D3. | 0.694 |
FKW77_002095 | FKW77_008954 | A0A517LI77 | A0A517LBI0 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | 0.698 |
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