STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
troBZinc transport system ATP-binding protein TroB. (241 aa)    
Predicted Functional Partners:
CRZ19242.1
ABC superfamily ATP binding cassette transporter, membrane protein.
 
 0.996
CRZ19635.1
Periplasmic binding protein; Belongs to the bacterial solute-binding protein 9 family.
  
 0.985
CRZ20354.1
Homologs of previously reported genes of unknown function.
  
 
 0.889
zur
Zinc uptake regulation protein; Belongs to the Fur family.
  
  
 0.636
denV
Endonuclease V.
       0.618
fur
DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the Fur family.
  
  
 0.442
hemU
Transport system permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
   
 0.409
Your Current Organism:
Kingella kingae
NCBI taxonomy Id: 504
Other names: ATCC 23330, CCUG 352, CIP 80.16, DSM 7536, K. kingae, Kingella kingii, Moraxella kingae, Moraxella kingii, NCTC 10529
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