Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRZ19307.1 | CRZ19912.1 | KKKWG1_0131 | KKKWG1_0738 | SPFH domain/Band 7 family protein. | Uncharacterized ABC transporter ATP-binding protein HI_1467. | 0.542 |
CRZ19912.1 | CRZ19307.1 | KKKWG1_0738 | KKKWG1_0131 | Uncharacterized ABC transporter ATP-binding protein HI_1467. | SPFH domain/Band 7 family protein. | 0.542 |
CRZ19912.1 | cirA | KKKWG1_0738 | KKKWG1_0289 | Uncharacterized ABC transporter ATP-binding protein HI_1467. | OMR family outer membrane cobalamin receptor. | 0.680 |
CRZ19912.1 | degV | KKKWG1_0738 | KKKWG1_0739 | Uncharacterized ABC transporter ATP-binding protein HI_1467. | Homologs of previously reported genes of unknown function. | 0.516 |
CRZ19912.1 | gltI | KKKWG1_0738 | KKKWG1_1839 | Uncharacterized ABC transporter ATP-binding protein HI_1467. | Glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein. | 0.414 |
CRZ19912.1 | recA | KKKWG1_0738 | KKKWG1_0687 | Uncharacterized ABC transporter ATP-binding protein HI_1467. | DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.539 |
cirA | CRZ19912.1 | KKKWG1_0289 | KKKWG1_0738 | OMR family outer membrane cobalamin receptor. | Uncharacterized ABC transporter ATP-binding protein HI_1467. | 0.680 |
degV | CRZ19912.1 | KKKWG1_0739 | KKKWG1_0738 | Homologs of previously reported genes of unknown function. | Uncharacterized ABC transporter ATP-binding protein HI_1467. | 0.516 |
gltI | CRZ19912.1 | KKKWG1_1839 | KKKWG1_0738 | Glutamate/aspartate ABC superfamily ATP binding cassette transporter, binding protein. | Uncharacterized ABC transporter ATP-binding protein HI_1467. | 0.414 |
recA | CRZ19912.1 | KKKWG1_0687 | KKKWG1_0738 | DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Uncharacterized ABC transporter ATP-binding protein HI_1467. | 0.539 |