Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CRZ20842.1Prophage MuMc02 protein. (160 aa)    
Predicted Functional Partners:
CRZ20841.1
Virion morphogenesis protein.
 
    0.949
CRZ20840.1
Homologs of previously reported genes of unknown function.
 
    0.947
CRZ20602.1
Virion morphogenesis protein.
 
    0.786
CRZ20932.1
Homologs of previously reported genes of unknown function.
 
    0.784
CRZ20937.1
Homologs of previously reported genes of unknown function.
 
    0.782
CRZ20604.1
Mu-like prophage FluMu protein gp28.
 
     0.779
CRZ20603.1
Homologs of previously reported genes of unknown function.
 
    0.777
CRZ20934.1
I protein.
 
    0.777
CRZ20928.1
Homologs of previously reported genes of unknown function.
 
     0.776
CRZ20918.1
Homologs of previously reported genes of unknown function.
 
     0.775
Your Current Organism:
Kingella kingae
NCBI taxonomy Id: 504
Other names: ATCC 23330, CCUG 352, CIP 80.16, DSM 7536, K. kingae, Kingella kingii, Moraxella kingae, Moraxella kingii, NCTC 10529
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