CRZ20842.1 protein (Kingella kingae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CRZ20842.1

Prophage MuMc02 protein. (160 aa)

Predicted Functional Partners:

CRZ20841.1

0.949

CRZ20840.1

0.947

CRZ20602.1

0.783

CRZ20937.1

0.782

CRZ20932.1

0.781

CRZ20603.1

0.779

CRZ20604.1

0.779

CRZ20934.1

0.778

CRZ20931.1

0.777

CRZ20928.1

0.776

Your Current Organism:

Kingella kingae

NCBI taxonomy Id: 504
Other names: ATCC 23330, CCUG 352, CIP 80.16, DSM 7536, K. kingae, Kingella kingii, Moraxella kingae, Moraxella kingii, NCTC 10529

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRZ20602.1	CRZ20603.1	KKKWG1_1423	KKKWG1_1424	Virion morphogenesis protein.	Homologs of previously reported genes of unknown function.	0.964
CRZ20602.1	CRZ20604.1	KKKWG1_1423	KKKWG1_1425	Virion morphogenesis protein.	Mu-like prophage FluMu protein gp28.	0.927
CRZ20602.1	CRZ20840.1	KKKWG1_1423	KKKWG1_1661	Virion morphogenesis protein.	Homologs of previously reported genes of unknown function.	0.863
CRZ20602.1	CRZ20842.1	KKKWG1_1423	KKKWG1_1663	Virion morphogenesis protein.	Prophage MuMc02 protein.	0.783
CRZ20602.1	CRZ20928.1	KKKWG1_1423	KKKWG1_1749	Virion morphogenesis protein.	Homologs of previously reported genes of unknown function.	0.777
CRZ20602.1	CRZ20931.1	KKKWG1_1423	KKKWG1_1752	Virion morphogenesis protein.	Mu-like prophage FluMu protein gp29.	0.790
CRZ20602.1	CRZ20934.1	KKKWG1_1423	KKKWG1_1755	Virion morphogenesis protein.	I protein.	0.784
CRZ20602.1	CRZ20937.1	KKKWG1_1423	KKKWG1_1758	Virion morphogenesis protein.	Homologs of previously reported genes of unknown function.	0.782
CRZ20603.1	CRZ20602.1	KKKWG1_1424	KKKWG1_1423	Homologs of previously reported genes of unknown function.	Virion morphogenesis protein.	0.964
CRZ20603.1	CRZ20604.1	KKKWG1_1424	KKKWG1_1425	Homologs of previously reported genes of unknown function.	Mu-like prophage FluMu protein gp28.	0.927
CRZ20603.1	CRZ20841.1	KKKWG1_1424	KKKWG1_1662	Homologs of previously reported genes of unknown function.	Virion morphogenesis protein.	0.852
CRZ20603.1	CRZ20842.1	KKKWG1_1424	KKKWG1_1663	Homologs of previously reported genes of unknown function.	Prophage MuMc02 protein.	0.779
CRZ20603.1	CRZ20928.1	KKKWG1_1424	KKKWG1_1749	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.765
CRZ20603.1	CRZ20932.1	KKKWG1_1424	KKKWG1_1753	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.788
CRZ20603.1	CRZ20934.1	KKKWG1_1424	KKKWG1_1755	Homologs of previously reported genes of unknown function.	I protein.	0.787
CRZ20603.1	CRZ20937.1	KKKWG1_1424	KKKWG1_1758	Homologs of previously reported genes of unknown function.	Homologs of previously reported genes of unknown function.	0.778
CRZ20604.1	CRZ20602.1	KKKWG1_1425	KKKWG1_1423	Mu-like prophage FluMu protein gp28.	Virion morphogenesis protein.	0.927
CRZ20604.1	CRZ20603.1	KKKWG1_1425	KKKWG1_1424	Mu-like prophage FluMu protein gp28.	Homologs of previously reported genes of unknown function.	0.927
CRZ20604.1	CRZ20840.1	KKKWG1_1425	KKKWG1_1661	Mu-like prophage FluMu protein gp28.	Homologs of previously reported genes of unknown function.	0.783
CRZ20604.1	CRZ20841.1	KKKWG1_1425	KKKWG1_1662	Mu-like prophage FluMu protein gp28.	Virion morphogenesis protein.	0.784