Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRZ21394.1 | pcm | KKKWG1_2216 | KKKWG1_2217 | Homologs of previously reported genes of unknown function. | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | 0.615 |
gltB | pcm | KKKWG1_1168 | KKKWG1_2217 | Glutamate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | 0.556 |
ispE | pcm | KKKWG1_1833 | KKKWG1_2217 | 4-diphosphocytidyl-2-C-methylerythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | 0.572 |
ligA-2 | pcm | KKKWG1_0525 | KKKWG1_2217 | DNA ligase (fragment). | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | 0.695 |
pcm | CRZ21394.1 | KKKWG1_2217 | KKKWG1_2216 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | Homologs of previously reported genes of unknown function. | 0.615 |
pcm | gltB | KKKWG1_2217 | KKKWG1_1168 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | Glutamate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.556 |
pcm | ispE | KKKWG1_2217 | KKKWG1_1833 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | 4-diphosphocytidyl-2-C-methylerythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.572 |
pcm | ligA-2 | KKKWG1_2217 | KKKWG1_0525 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | DNA ligase (fragment). | 0.695 |
pcm | surE | KKKWG1_2217 | KKKWG1_2139 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | Broad specificity 5'(3')-nucleotidase and polyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.804 |
surE | pcm | KKKWG1_2139 | KKKWG1_2217 | Broad specificity 5'(3')-nucleotidase and polyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | Protein-L-isoaspartate(D-aspartate) O-methyltransferase. | 0.804 |