STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_04393Maspardin. (290 aa)    
Predicted Functional Partners:
N301_05459
Tectonin beta-propeller repeat-containing protein 2.
      
 0.615
N301_03009
Spartin.
      
 0.564
N301_12780
Tumor necrosis factor ligand superfamily member 15.
      
 0.495
N301_03183
Lymphocyte function-associated antigen 3.
      
 0.489
N301_06787
Magnesium transporter NIPA1.
      
 0.485
N301_08941
Paraplegin.
      
 0.485
N301_01600
SLAM family member 7.
      
 0.478
N301_09999
Proteasomal ATPase-associated factor 1.
      
 0.461
N301_04034
AP-5 complex subunit zeta-1.
      
 0.453
N301_06700
ATP synthase mitochondrial F1 complex assembly factor 2.
   
   0.402
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.