Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
N301_00138 | N301_07987 | A0A0A0A7Y4 | A0A0A0AAR2 | Ras-related protein Rab-38. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.663 |
N301_00138 | N301_08750 | A0A0A0A7Y4 | A0A0A0AEM4 | Ras-related protein Rab-38. | Cyclin-G-associated kinase. | 0.741 |
N301_00138 | N301_10345 | A0A0A0A7Y4 | A0A0A0AG97 | Ras-related protein Rab-38. | Putative tyrosine-protein phosphatase auxilin. | 0.626 |
N301_00138 | N301_11193 | A0A0A0A7Y4 | A0A0A0AAQ8 | Ras-related protein Rab-38. | Rab proteins geranylgeranyltransferase component A 2. | 0.717 |
N301_00138 | N301_11550 | A0A0A0A7Y4 | A0A0A0ALY1 | Ras-related protein Rab-38. | Hermansky-Pudlak syndrome 1 protein. | 0.657 |
N301_00138 | N301_12349 | A0A0A0A7Y4 | A0A0A0AHJ3 | Ras-related protein Rab-38. | Rab5 GDP/GTP exchange factor. | 0.450 |
N301_00138 | N301_12532 | A0A0A0A7Y4 | A0A0A0AYX7 | Ras-related protein Rab-38. | GTPase-activating protein and VPS9 domain-containing protein 1. | 0.401 |
N301_00138 | N301_12667 | A0A0A0A7Y4 | A0A0A0A720 | Ras-related protein Rab-38. | Ankyrin repeat domain-containing protein 27. | 0.739 |
N301_07987 | N301_00138 | A0A0A0AAR2 | A0A0A0A7Y4 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Ras-related protein Rab-38. | 0.663 |
N301_07987 | N301_11193 | A0A0A0AAR2 | A0A0A0AAQ8 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Rab proteins geranylgeranyltransferase component A 2. | 0.651 |
N301_07987 | N301_12349 | A0A0A0AAR2 | A0A0A0AHJ3 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Rab5 GDP/GTP exchange factor. | 0.987 |
N301_07987 | N301_12532 | A0A0A0AAR2 | A0A0A0AYX7 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | GTPase-activating protein and VPS9 domain-containing protein 1. | 0.678 |
N301_07987 | N301_12667 | A0A0A0AAR2 | A0A0A0A720 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Ankyrin repeat domain-containing protein 27. | 0.662 |
N301_08750 | N301_00138 | A0A0A0AEM4 | A0A0A0A7Y4 | Cyclin-G-associated kinase. | Ras-related protein Rab-38. | 0.741 |
N301_08750 | N301_10345 | A0A0A0AEM4 | A0A0A0AG97 | Cyclin-G-associated kinase. | Putative tyrosine-protein phosphatase auxilin. | 0.992 |
N301_08750 | N301_12349 | A0A0A0AEM4 | A0A0A0AHJ3 | Cyclin-G-associated kinase. | Rab5 GDP/GTP exchange factor. | 0.593 |
N301_08750 | N301_12532 | A0A0A0AEM4 | A0A0A0AYX7 | Cyclin-G-associated kinase. | GTPase-activating protein and VPS9 domain-containing protein 1. | 0.526 |
N301_08750 | N301_12667 | A0A0A0AEM4 | A0A0A0A720 | Cyclin-G-associated kinase. | Ankyrin repeat domain-containing protein 27. | 0.526 |
N301_10345 | N301_00138 | A0A0A0AG97 | A0A0A0A7Y4 | Putative tyrosine-protein phosphatase auxilin. | Ras-related protein Rab-38. | 0.626 |
N301_10345 | N301_08750 | A0A0A0AG97 | A0A0A0AEM4 | Putative tyrosine-protein phosphatase auxilin. | Cyclin-G-associated kinase. | 0.992 |
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