STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_07023VPS10 domain-containing receptor SorCS3. (991 aa)    
Predicted Functional Partners:
N301_08750
Cyclin-G-associated kinase.
     
 0.979
N301_11902
Tumor necrosis factor receptor superfamily member 16.
    
 0.764
N301_08702
Vacuolar protein sorting-associated protein 35.
    
 
 0.676
N301_02305
Cation-independent mannose-6-phosphate receptor.
    
 0.674
N301_15379
Clathrin heavy chain 1.
    
 0.645
N301_08309
Clathrin heavy chain 1.
    
 0.645
N301_08909
Proteasome subunit alpha type.
    
   0.637
N301_05847
Proteasome subunit alpha type.
    
   0.637
N301_14293
Proteasome subunit beta.
    
   0.637
N301_06245
Proteasome endopeptidase complex.
    
   0.637
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.