STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_15906Syntaxin-3. (265 aa)    
Predicted Functional Partners:
N301_15294
Vesicle-associated membrane protein 3.
    
 0.954
N301_07496
Synaptobrevin.
    
 0.951
N301_10995
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.945
N301_09658
Vesicle-associated membrane protein 4.
    
 0.940
N301_08564
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 0.903
N301_07270
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.882
N301_07269
Syntaxin-binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.882
N301_13915
Vesicle-associated membrane protein 3.
    
 0.871
N301_04441
Alpha-soluble NSF attachment protein.
    
 0.857
N301_10939
Beta-soluble NSF attachment protein.
    
 0.857
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.