STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_10352EF-hand calcium-binding domain-containing protein 7. (630 aa)    
Predicted Functional Partners:
N301_14554
Myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.873
N301_04922
Peripheral plasma membrane protein CASK.
    
 0.869
N301_12675
IQ domain-containing protein E.
   
 0.855
N301_00836
Calcium/calmodulin-dependent protein kinase type II subunit beta.
    
 0.713
N301_16061
Limbin.
     
 0.713
N301_16767
WD repeat-containing protein 90.
   
 
 0.701
N301_08513
Troponin I, slow skeletal muscle.
   
 0.690
N301_03977
Troponin I, fast skeletal muscle.
   
 0.690
N301_03008
Serine/threonine-protein kinase DCLK1.
   
 0.680
N301_03006
Serine/threonine-protein kinase DCLK1; Belongs to the protein kinase superfamily.
   
 0.678
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.