STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_07919FERM domain-containing protein 4A. (992 aa)    
Predicted Functional Partners:
N301_00786
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3.
    
 0.601
N301_01806
Uncharacterized protein.
    
 0.598
N301_14278
FERM domain-containing protein 6.
    
 0.573
N301_11638
FERM domain-containing protein 6.
    
0.573
N301_14057
E3 ubiquitin-protein ligase TRIP12.
    
 0.559
N301_02314
Fibronectin type III domain-containing protein 1.
    
  0.552
N301_10202
Cytohesin-4.
    
 
 0.549
N301_03793
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.527
N301_16204
Pleckstrin homology domain-containing family A member 5.
    
 0.525
N301_07878
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2.
    
 0.495
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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