STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_14096Ras-GEF domain-containing family member 1A. (412 aa)    
Predicted Functional Partners:
N301_13211
Rap guanine nucleotide exchange factor 2.
    
  0.648
N301_02042
Son of sevenless 1.
    
0.627
N301_11625
Son of sevenless 2.
    
 0.562
N301_05770
Ras-specific guanine nucleotide-releasing factor 2.
   
 0.536
N301_02070
RAS guanyl-releasing protein 1.
    
0.532
N301_06714
GRB2-related adapter protein.
   
 
  0.519
N301_13713
Ras guanyl-releasing protein 3.
    
0.513
N301_09257
Rap guanine nucleotide exchange factor 6.
    
 0.508
N301_12420
Rap guanine nucleotide exchange factor 1.
    
0.507
N301_10928
Ras-related protein Ral-A.
     
 0.503
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.