STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_03362Protein patched 1. (777 aa)    
Predicted Functional Partners:
N301_08010
G_PROTEIN_RECEP_F2_4 domain-containing protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.979
N301_00300
Indian hedgehog protein.
   
 0.964
N301_05984
Sonic hedgehog protein.
   
 0.963
N301_12869
Desert hedgehog protein.
   
 0.960
N301_03223
Brother of CDO.
    
 0.906
N301_07208
Cell adhesion molecule-related/down-regulated by oncogenes.
    
 0.906
N301_08078
E3 ubiquitin-protein ligase SMURF2.
    
 0.899
N301_05622
Protein patched 1.
  
  
0.834
N301_16112
Uncharacterized protein.
   
 0.789
N301_03102
Low-density lipoprotein receptor-related protein 2.
     
 0.757
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.