STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_09371Mitochondrial inner membrane protein COX18. (204 aa)    
Predicted Functional Partners:
N301_06031
Protein transport protein Sec61 subunit alpha isoform 1.
   
 0.986
SRP54
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
 0.949
N301_15882
Signal recognition particle receptor subunit alpha.
  
 
 0.935
N301_16685
Tim44 domain-containing protein.
   
 
 0.913
N301_10748
Cytochrome c oxidase assembly protein COX15.
     
 0.913
N301_06357
RF_PROK_I domain-containing protein.
  
 
 0.880
N301_14552
Uncharacterized protein.
  
 
 0.875
N301_16493
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
   0.853
N301_03982
Uncharacterized protein.
   
 
 0.848
N301_14048
Uncharacterized protein.
  
 
 0.825
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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