STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_04594WASH complex subunit CCDC53. (187 aa)    
Predicted Functional Partners:
N301_11702
Heat shock factor-binding protein 1.
    
 0.966
N301_04732
WASH complex subunit strumpellin.
    
 0.920
N301_10681
WASH complex subunit FAM21A.
    
 
 0.863
N301_10441
Neural Wiskott-Aldrich syndrome protein.
     
 0.792
N301_07190
CapZ-interacting protein.
    
 
 0.750
N301_05529
Heat shock factor protein 2.
    
 0.635
N301_00712
Heat shock factor protein 4.
    
 0.635
N301_00430
Heat shock factor protein 1.
    
 0.635
N301_12261
Meteorin-like.
    
 0.521
N301_14150
Meteorin-like.
    
 0.521
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.