STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_11557Protrudin. (338 aa)    
Predicted Functional Partners:
N301_14011
Vesicle-associated membrane protein-associated protein A.
    
 
 0.644
N301_09408
Delta-1-pyrroline-5-carboxylate synthase.
      
 0.615
N301_05070
Receptor expression-enhancing protein.
    
 
 0.564
N301_05874
StAR-related lipid transfer protein 3.
   
  
 0.528
N301_05459
Tectonin beta-propeller repeat-containing protein 2.
   
  
 0.479
N301_11232
Motile sperm domain-containing protein 1.
    
 
 0.466
N301_11944
FYVE and coiled-coil domain-containing protein 1.
      
 0.463
N301_04732
WASH complex subunit strumpellin.
      
 0.461
N301_07075
PDZ domain-containing protein 8.
      
 0.461
N301_02776
Katanin p60 ATPase-containing subunit A-like 2.
    
 
 0.456
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.