STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_07164Lysophosphatidic acid phosphatase type 6; Belongs to the histidine acid phosphatase family. (355 aa)    
Predicted Functional Partners:
N301_13477
Peroxisomal NADH pyrophosphatase NUDT12.
    
  0.863
N301_02861
Low molecular weight phosphotyrosine protein phosphatase.
     
 0.771
N301_11091
Calcineurin-like phosphoesterase domain-containing protein 1.
   
 
 0.716
N301_13405
Serine/threonine-protein kinase PLK1.
    
 0.628
N301_14848
Serine/threonine-protein kinase PLK2.
    
 0.628
N301_04373
Ras-related protein Rab-11A.
    
 0.497
N301_14579
Ras-related protein Rab-11B.
    
 0.497
N301_13308
Rab-like 2A.
    
 0.497
N301_01216
Ras-related protein Rab-25.
    
 0.497
N301_01215
Ras-related protein Rab-11A.
    
 0.497
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.