STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_00347Trafficking protein particle complex subunit 2-like. (137 aa)    
Predicted Functional Partners:
N301_02138
Trafficking protein particle complex subunit 6B.
   
 0.999
N301_05425
Trafficking protein particle complex subunit 5.
   
 0.998
N301_11695
Trafficking protein particle complex subunit 2.
    
 0.997
N301_14994
Trafficking protein particle complex subunit 8.
    
 0.996
N301_11475
Trafficking protein particle complex subunit 11.
    
 0.996
N301_02880
Trafficking protein particle complex subunit 12.
    
 0.990
N301_04077
Trafficking protein particle complex subunit 13.
    
 0.981
N301_15634
Trafficking protein particle complex subunit 3-like.
    
 0.970
N301_15514
Trafficking protein particle complex subunit 3.
    
 0.970
N301_06831
Trafficking protein particle complex subunit 9.
    
 0.968
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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