STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_15730Cysteine-rich and transmembrane domain-containing protein 1. (111 aa)    
Predicted Functional Partners:
N301_01681
Adenylate kinase 9.
    
  0.875
N301_02218
Protein unc-79.
    
 0.786
N301_02217
Protein unc-79.
    
 0.786
N301_16476
E3 SUMO-protein ligase RanBP2.
    
 0.682
N301_16475
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.682
N301_04929
Lysine-specific demethylase 6A.
    
 0.649
N301_01680
Adenylate kinase 9.
    
  0.584
N301_01682
Adenylate kinase 9.
    
  0.584
N301_06600
Retinoblastoma-binding protein 5.
    
 0.575
N301_00654
Set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.572
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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