STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_14271Ribonuclease T2; Belongs to the RNase T2 family. (216 aa)    
Predicted Functional Partners:
N301_02345
Golgi apparatus protein 1.
      
 0.475
N301_06036
Podocalyxin-like 2.
      
 0.463
N301_02249
Protein Mpv17; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
 
 0.462
N301_00499
Profilin; Belongs to the profilin family.
      
 0.461
N301_00360
F-box/LRR-repeat protein 7.
     
 0.425
N301_09874
Sorbitol dehydrogenase.
   
  
 0.423
N301_12075
Pseudouridylate synthase 7 homolog-like.
      
 0.408
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.