STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_02476Pleckstrin homology domain-containing family M member 3. (759 aa)    
Predicted Functional Partners:
N301_10664
WD repeat-and FYVE domain-containing protein 4.
   
 
  0.789
N301_10662
WD repeat-and FYVE domain-containing protein 4.
   
 
  0.789
N301_13059
UV radiation resistance-associated gene protein.
    
 0.720
N301_02478
Cyclin-Y-like 1-B; Belongs to the cyclin family.
      
 0.534
N301_01690
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.425
N301_15214
Ras-related protein Rab-4A.
    
  0.420
N301_13336
Phosphatidylinositol 3-kinase catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
    
 
 0.418
N301_14826
Beclin-1.
    
 
 0.406
N301_12295
Uncharacterized protein.
   
  
 0.406
N301_11505
Pleckstrin homology domain-containing family M member 1.
 
   
  0.400
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.