STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N301_12500Erythrocyte band 7 integral membrane protein. (264 aa)    
Predicted Functional Partners:
N301_13999
AFG3-like 2.
  
 0.805
N301_02294
ATP-dependent zinc metalloprotease YME1L1.
  
 0.805
N301_08941
Paraplegin.
  
 0.805
N301_12295
Uncharacterized protein.
   
 0.716
N301_08089
Rhomboid-related protein 3; Belongs to the peptidase S54 family.
  
 0.657
N301_15124
Actin-binding protein anillin.
    
 0.647
N301_06876
Uncharacterized protein.
    
 0.643
N301_03864
Flotillin; Belongs to the band 7/mec-2 family. Flotillin subfamily.
    
 0.634
N301_01860
Rho-related GTP-binding protein RhoH.
    
 0.616
N301_03503
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
  0.591
Your Current Organism:
Charadrius vociferus
NCBI taxonomy Id: 50402
Other names: Aegialitis vocifera, C. vociferus, Charadrius vociferous, Oxyechus vociferus, killdeer
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.