Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ago2 | DICER1 | A0A2B4R957 | A0A2B4RI94 | Protein argonaute-2; Belongs to the argonaute family. | Endoribonuclease Dicer. | 0.640 |
Ago2 | DROSHA | A0A2B4R957 | A0A2B4S762 | Protein argonaute-2; Belongs to the argonaute family. | Ribonuclease 3. | 0.677 |
Ago2 | Dcr-1 | A0A2B4R957 | A0A2B4SBB2 | Protein argonaute-2; Belongs to the argonaute family. | Endoribonuclease Dcr-1. | 0.640 |
Ago2 | Dcr-1-2 | A0A2B4R957 | A0A2B4SF62 | Protein argonaute-2; Belongs to the argonaute family. | Endoribonuclease Dcr-1. | 0.640 |
Ago2 | Dicer1 | A0A2B4R957 | A0A2B4SDP6 | Protein argonaute-2; Belongs to the argonaute family. | Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. | 0.640 |
Ago2 | Prkra | A0A2B4R957 | A0A2B4S6J2 | Protein argonaute-2; Belongs to the argonaute family. | Interferon-inducible double-stranded RNA-dependent protein kinase activator A. | 0.702 |
Ago2 | Tnrc6a | A0A2B4R957 | A0A2B4RTS3 | Protein argonaute-2; Belongs to the argonaute family. | Trinucleotide repeat-containing gene 6A protein. | 0.835 |
Ago2 | dcl1 | A0A2B4R957 | A0A2B4RFJ4 | Protein argonaute-2; Belongs to the argonaute family. | Dicer-like protein 1. | 0.813 |
Ago2 | dicer1 | A0A2B4R957 | A0A2B4SEC2 | Protein argonaute-2; Belongs to the argonaute family. | Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. | 0.640 |
Ago2 | prkra-a | A0A2B4R957 | A0A2B4RTT8 | Protein argonaute-2; Belongs to the argonaute family. | Interferon-inducible double-stranded RNA-dependent protein kinase activator A-like A. | 0.702 |
DICER1 | Ago2 | A0A2B4RI94 | A0A2B4R957 | Endoribonuclease Dicer. | Protein argonaute-2; Belongs to the argonaute family. | 0.640 |
DICER1 | Prkra | A0A2B4RI94 | A0A2B4S6J2 | Endoribonuclease Dicer. | Interferon-inducible double-stranded RNA-dependent protein kinase activator A. | 0.773 |
DICER1 | prkra-a | A0A2B4RI94 | A0A2B4RTT8 | Endoribonuclease Dicer. | Interferon-inducible double-stranded RNA-dependent protein kinase activator A-like A. | 0.773 |
DROSHA | Ago2 | A0A2B4S762 | A0A2B4R957 | Ribonuclease 3. | Protein argonaute-2; Belongs to the argonaute family. | 0.677 |
DROSHA | Prkra | A0A2B4S762 | A0A2B4S6J2 | Ribonuclease 3. | Interferon-inducible double-stranded RNA-dependent protein kinase activator A. | 0.784 |
DROSHA | prkra-a | A0A2B4S762 | A0A2B4RTT8 | Ribonuclease 3. | Interferon-inducible double-stranded RNA-dependent protein kinase activator A-like A. | 0.784 |
Dcr-1 | Ago2 | A0A2B4SBB2 | A0A2B4R957 | Endoribonuclease Dcr-1. | Protein argonaute-2; Belongs to the argonaute family. | 0.640 |
Dcr-1 | Prkra | A0A2B4SBB2 | A0A2B4S6J2 | Endoribonuclease Dcr-1. | Interferon-inducible double-stranded RNA-dependent protein kinase activator A. | 0.773 |
Dcr-1 | dicer1 | A0A2B4SBB2 | A0A2B4SEC2 | Endoribonuclease Dcr-1. | Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. | 0.928 |
Dcr-1 | prkra-a | A0A2B4SBB2 | A0A2B4RTT8 | Endoribonuclease Dcr-1. | Interferon-inducible double-stranded RNA-dependent protein kinase activator A-like A. | 0.773 |
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