STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2B4RAM1SEA domain-containing protein. (603 aa)    
Predicted Functional Partners:
Fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.997
ELMO1
Engulfment and cell motility protein 1.
    
 0.995
EEF1G
Elongation factor 1-gamma.
   
 
 0.956
RPL6
60S ribosomal protein L6.
  
 0.942
Rps11
40S ribosomal protein S11.
  
 0.942
RPLP0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.937
Rpl23a
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.937
RPL5
60S ribosomal protein L5.
  
 0.937
RPS3
40S ribosomal protein S3.
  
 0.937
rpl24
60S ribosomal protein L24.
  
 0.936
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.