STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBP4WW domain-binding protein 4. (223 aa)    
Predicted Functional Partners:
prpf31
U4/U6 small nuclear ribonucleoprotein Prp31.
    
 0.917
Zmat2
Zinc finger matrin-type protein 2.
   
 0.895
prpf38a
Pre-mRNA-splicing factor 38A.
   
 0.888
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
    
 
 0.888
MFAP1
Microfibrillar-associated protein 1.
   
 0.885
SmB
Small nuclear ribonucleoprotein-associated protein.
    
 
 0.873
SMU1
WD40 repeat-containing protein SMU1.
    
 0.858
Prpf6
Pre-mRNA-processing factor 6.
    
 0.842
Ik
Protein Red.
   
  0.836
Txnl4a
Thioredoxin-like protein 4A.
    
  0.832
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.