STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2B4RBU4Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
chmp3
Charged multivesicular body protein 3.
   
 0.673
chmp2a
Charged multivesicular body protein 2a.
    
 0.640
CHMP6
Charged multivesicular body protein 6.
    
 0.626
Chmp5
Charged multivesicular body protein 5.
   
 0.613
Ptpn23
Tyrosine-protein phosphatase non-receptor type 23.
    
 0.612
IST1
IST1-like.
    
 0.593
Snf8
Vacuolar-sorting protein SNF8.
    
 0.575
VPS4B
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
    
 0.570
VPS4B-2
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
    
 0.570
vps36
Vacuolar protein-sorting-associated protein 36.
    
 0.526
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.