STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NBASNeuroblastoma-amplified sequence. (2360 aa)    
Predicted Functional Partners:
RINT1
RAD50-interacting protein 1.
    
 0.989
stx18
Syntaxin-18; Belongs to the syntaxin family.
    
 0.986
use1
Vesicle transport protein USE1.
    
 0.979
Zw10
Centromere/kinetochore protein zw10-like.
    
 0.960
ZW10
Centromere/kinetochore protein zw10-like.
    
 0.960
NAPG
Gamma-soluble NSF attachment protein.
    
 0.848
Sec22b
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 0.833
SCFD2
Sec1 family domain-containing protein 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.829
RPS6KL1
Ribosomal protein S6 kinase-like 1.
   
 0.822
RPS6KA5
Ribosomal protein S6 kinase.
    
 0.816
Your Current Organism:
Stylophora pistillata
NCBI taxonomy Id: 50429
Other names: S. pistillata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.