Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX56 | DIMT1 | A0A2B4SUR8 | A0A2B4SUS0 | Putative ATP-dependent RNA helicase DDX56. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.741 |
DDX56 | Rpf2 | A0A2B4SUR8 | A0A2B4SS17 | Putative ATP-dependent RNA helicase DDX56. | Ribosome production factor 2-like. | 0.991 |
DDX56 | Utp3 | A0A2B4SUR8 | A0A2B4SX35 | Putative ATP-dependent RNA helicase DDX56. | Something about silencing protein 10. | 0.698 |
DDX56 | Wdr43 | A0A2B4SUR8 | A0A2B4RWJ3 | Putative ATP-dependent RNA helicase DDX56. | WD repeat-containing protein 43. | 0.838 |
DDX56 | Wdr89 | A0A2B4SUR8 | A0A2B4RKK3 | Putative ATP-dependent RNA helicase DDX56. | WD repeat-containing protein 89. | 0.462 |
DDX56 | sdad1 | A0A2B4SUR8 | A0A2B4S8Q8 | Putative ATP-dependent RNA helicase DDX56. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.772 |
DIMT1 | DDX56 | A0A2B4SUS0 | A0A2B4SUR8 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Putative ATP-dependent RNA helicase DDX56. | 0.741 |
DIMT1 | Rpf2 | A0A2B4SUS0 | A0A2B4SS17 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Ribosome production factor 2-like. | 0.931 |
DIMT1 | Utp3 | A0A2B4SUS0 | A0A2B4SX35 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Something about silencing protein 10. | 0.958 |
DIMT1 | Wdr43 | A0A2B4SUS0 | A0A2B4RWJ3 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | WD repeat-containing protein 43. | 0.961 |
DIMT1 | Wdr89 | A0A2B4SUS0 | A0A2B4RKK3 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | WD repeat-containing protein 89. | 0.433 |
DIMT1 | sdad1 | A0A2B4SUS0 | A0A2B4S8Q8 | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.749 |
DNLZ | Wdr89 | A0A2B4RAN4 | A0A2B4RKK3 | DNL-type zinc finger protein. | WD repeat-containing protein 89. | 0.443 |
Rpf2 | DDX56 | A0A2B4SS17 | A0A2B4SUR8 | Ribosome production factor 2-like. | Putative ATP-dependent RNA helicase DDX56. | 0.991 |
Rpf2 | DIMT1 | A0A2B4SS17 | A0A2B4SUS0 | Ribosome production factor 2-like. | rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.931 |
Rpf2 | Utp3 | A0A2B4SS17 | A0A2B4SX35 | Ribosome production factor 2-like. | Something about silencing protein 10. | 0.954 |
Rpf2 | Wdr43 | A0A2B4SS17 | A0A2B4RWJ3 | Ribosome production factor 2-like. | WD repeat-containing protein 43. | 0.953 |
Rpf2 | Wdr89 | A0A2B4SS17 | A0A2B4RKK3 | Ribosome production factor 2-like. | WD repeat-containing protein 89. | 0.404 |
Rpf2 | sdad1 | A0A2B4SS17 | A0A2B4S8Q8 | Ribosome production factor 2-like. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.985 |
Utp3 | DDX56 | A0A2B4SX35 | A0A2B4SUR8 | Something about silencing protein 10. | Putative ATP-dependent RNA helicase DDX56. | 0.698 |
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